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Flint Metagenomics
Flint is a metagenomics profiling pipeline that is built on top of the Apache Spark framework, and is designed for fast real-time profiling of metagenomic samples against a large collection of reference genomes.
Resources 🗄
Documentation 📗
Publication 🏷
Flint can be referenced by using the citation:
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Valdes C, Stebliankin V, Narasimhan G. Large scale microbiome profiling in the cloud. Bioinformatics. 2019;35:i13–i22.